miRBase entry: oan-mir-1421ad

Stem-loop oan-mir-1421ad


Accession
MI0006947
Description
Ornithorhynchus anatinus oan-mir-1421ad precursor miRNA
Gene family
MIPF0000564; mir-1421


Sequence

1019 reads, 523 reads per million, 4 experiments
acggcauggagugAACAGGUUAUUCGCGGUGCAGUgugauaguggaauauacUGCAUCACGUGUAACCUCCCUAcacgaaggcugu
(((((.....(((...(((((((.((.(((((((((((.........))))))))))).)).))))))).....)))....)))))

Structure
     augga   --AAC       U  C           aua 
acggc     gug     AGGUUAU CG GGUGCAGUgug   g
|||||     |||     ||||||| || |||||||||||   u
ugucg     cac     UCCAAUG GC CUACGUcauau   g
     -gaag   AUCCC       U  A           aag 


Annotation confidence Not enough data
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Genome context
X1: 44314924-44315009 [-]
Clustered miRNAs
8 other miRNAs are < 10 kb from oan-mir-1421ad
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-1421ad-5p

Accession MIMAT0007259
Description Ornithorhynchus anatinus oan-miR-1421ad-5p mature miRNA
Sequence 14 - AACAGGUUAUUCGCGGUGCAGU - 35
Evidence experimental
Illumina [1]

Mature oan-miR-1421ad-3p

Accession MIMAT0007260
Description Ornithorhynchus anatinus oan-miR-1421ad-3p mature miRNA
Sequence 53 - UGCAUCACGUGUAACCUCCCUA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004