miRBase entry: oan-mir-1421v

Stem-loop oan-mir-1421v


Accession
MI0006935
Description
Ornithorhynchus anatinus oan-mir-1421v precursor miRNA
Gene family
MIPF0000564; mir-1421


Sequence

1 reads, 0 reads per million, 1 experiments
gaccuccggcacgugugAACAGGUUACACGUGAUGCAGUgugguaguggaauaUGCUGCAUCACGUUUGAUCUCCcuacacugcacugaguc
...(((.((((.(((((...((((((.(((((((((((((((.........))))))))))))))).))))))...)))))))).).)))..

Structure
gac   c -   c     AAC      C               gua 
   cuc g gca gugug   AGGUUA ACGUGAUGCAGUgug   g
   ||| | ||| |||||   |||||| |||||||||||||||   u
   gag c cgu cacau   UCUAGU UGCACUACGUCGUau   g
-cu   u a   -     cCC      U               aag 


Annotation confidence Not enough data
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Genome context
X1: 44282335-44282426 [-]
Clustered miRNAs
8 other miRNAs are < 10 kb from oan-mir-1421v
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-1421v-5p

Accession MIMAT0007236
Description Ornithorhynchus anatinus oan-miR-1421v-5p mature miRNA
Sequence 18 - AACAGGUUACACGUGAUGCAGU - 39
Evidence experimental
Illumina [1]

Mature oan-miR-1421v-3p

Accession MIMAT0007237
Description Ornithorhynchus anatinus oan-miR-1421v-3p mature miRNA
Sequence 54 - UGCUGCAUCACGUUUGAUCUCC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004