miRBase entry: oan-mir-1413

Stem-loop oan-mir-1413


Accession
MI0006933
Description
Ornithorhynchus anatinus oan-mir-1413 precursor miRNA


Sequence

40 reads, 2 reads per million, 4 experiments
gccgcggggcggccgGAGGGACCCCAGCGCCCGGCACCgcucccugucccugUGCCGCGAGCUGGAGCCUUACGcggccguccugaccggc
((((((((((((((((((((.(.(((((.(.((((((.((.....))....)))))).).))))).))))).).)))))))))))..))))

Structure
    --           - -    A C     G C      ---C  u 
gccg  cggggcggccg G AGGG C CCAGC C CGGCAC    gc c
||||  ||||||||||| | |||| | ||||| | ||||||    || c
cggc  guccugccggc C UUCC G GGUCG G GCCGUg    ug c
    ca           G A    - A     A C      uccc  u 


Annotation confidence Not enough data
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Genome context
X1: 29292974-29293064 [-]

Database links

Mature oan-miR-1413-3p

Accession MIMAT0007233
Description Ornithorhynchus anatinus oan-miR-1413-3p mature miRNA
Sequence 53 - UGCCGCGAGCUGGAGCCUUACG - 74
Evidence experimental
Illumina [1-2]

Mature oan-miR-1413-5p

Accession MIMAT0026761
Description Ornithorhynchus anatinus oan-miR-1413-5p mature miRNA
Sequence 16 - GAGGGACCCCAGCGCCCGGCACC - 38
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45