miRBase entry: oan-mir-1411

Stem-loop oan-mir-1411


Accession
MI0006929
Description
Ornithorhynchus anatinus oan-mir-1411 precursor miRNA


Sequence

70 reads, 3 reads per million, 3 experiments
uuaagugcugggauacauaacaaguaagcagaucagacacuuguuccuguucuaugugggucucaaggucuaagagaGAGAUAGAAAUAAGAACUguuauuugccaaucuauguucacaguauuga
...(((((((.((.(((((........((((((..((((...((((.((((((((.....((((.........))))...)))).)))).)))))))))))))).....))))))).)))))))..

Structure
uua       g  u     acaaguaa      ca    cuu    c    -    guggg    aag 
   agugcug ga acaua        gcagau  gaca   guuc uguu cuau     ucuc   g
   ||||||| || |||||        ||||||  ||||   |||| |||| ||||     ||||   u
   uuaugac cu uguau        cguuua  uugU   CAAG AUAA GAUA     agag   c
-ag       a  -     ---cuaac      --    ---    A    A    --GAG    aau 


Annotation confidence Not enough data
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Genome context
X1: 5940421-5940546 [-]

Database links

Mature oan-miR-1411

Accession MIMAT0007229
Description Ornithorhynchus anatinus oan-miR-1411 mature miRNA
Sequence 78 - GAGAUAGAAAUAAGAACU - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004