miRBase entry: oan-mir-1410

Stem-loop oan-mir-1410


Accession
MI0006928
Description
Ornithorhynchus anatinus oan-mir-1410 precursor miRNA


Sequence

31 reads, 2 reads per million, 4 experiments
ggcgcccgccggcuugguccccacugcaGAGACGGAGUCGUGAGUGcugccaccguuggaggaagccucuuaaagggccagucacuuuccccccuuccccagacaugcugccgcugcc
(((....)))(((.((((.....(((..(((..((((..((((.((..(((......(((((...))))).....))))).)))).))))....)))..))).......))))..)))

Structure
ggcgcccgcc   -u    --cccca   ca   --AC    UC    G  cu   accguu     a 
          ggc  uggu       cug  GAG    GGAG  GUGA UG  gcc      ggagg  
          |||  ||||       |||  |||    ||||  |||| ||  |||      ||||| a
          ccg  gccg       gac  cuu    ccuu  cacu ac  cgg      ucucc  
----------   uc    ucguaca   cc   cccc    -u    g  --   -gaaau     g 


Annotation confidence Not enough data
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Genome context
Ultra710: 18373-18490 [-]

Database links

Mature oan-miR-1410

Accession MIMAT0007228
Description Ornithorhynchus anatinus oan-miR-1410 mature miRNA
Sequence 29 - GAGACGGAGUCGUGAGUG - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004