miRBase entry: oan-mir-1395

Stem-loop oan-mir-1395


Accession
MI0006906
Description
Ornithorhynchus anatinus oan-mir-1395 precursor miRNA


Sequence

427 reads, 21 reads per million, 2 experiments
cgcagccaucguugccuagccccaGCCGAACUGGCCUUUCCUGGGCCgaacuccaagugauggUCCUGAAGGGCUAAUUCCGCUggggccggggacaguuccuuggacugacg
((((((((...((((((.((((((((.(((.(((((((((..((((((.(((...)))..)))))).))))))))).))).))))))))..))).))).....))).))).))

Structure
  -   -   --ucg   -   -a        C   C         CU      -a   c 
cg cag cca     uug ccu  gccccaGC GAA UGGCCUUUC  GGGCCg  acu  
|| ||| |||     ||| |||  |||||||| ||| |||||||||  ||||||  ||| c
gc guc ggu     gac ggg  cggggUCG CUU AUCGGGAAG  CCUggu  uga  
  a   a   uccuu   a   gc        C   A         -U      ag   a 


Annotation confidence Not enough data
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Genome context
Ultra46: 184818-184930 [-]

Database links

Mature oan-miR-1395-3p

Accession MIMAT0007197
Description Ornithorhynchus anatinus oan-miR-1395-3p mature miRNA
Sequence 64 - UCCUGAAGGGCUAAUUCCGCU - 84
Evidence experimental
Illumina [1-2]

Mature oan-miR-1395-5p

Accession MIMAT0026759
Description Ornithorhynchus anatinus oan-miR-1395-5p mature miRNA
Sequence 25 - GCCGAACUGGCCUUUCCUGGGCC - 47
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45