miRBase entry: oan-mir-302-1

Stem-loop oan-mir-302-1


Accession
MI0006904
Description
Ornithorhynchus anatinus oan-mir-302-1 precursor miRNA
Gene family
MIPF0000071; mir-302


Sequence

8 reads, 0 reads per million, 2 experiments
acgugaagguaguuuguaaauuugauuucagggcucccugucacuuaaacguggauaaacuugcuuuacuuuuaaagUAAGUGCUUCCAUGUUUUAGUgaugguguuaccaaaauuucuucgaugu
(((((((((.(((((.............((((....))))(((((.(((((((((...((((((((((....))))))))))...))))))))).)))))((((...)))))))))))))).))))

Structure
    -     u     guaaauuugauuucagggcucccug     u         uaa          c 
acgu gaagg aguuu                         ucacu aaacgugga   acuugcuuua u
|||| ||||| |||||                         ||||| |||||||||   ||||||||||  
ugua cuucu uuaaa                         agUGA UUUGUACCU   UGAAUgaaau u
    g     -     --------------accauuguggu     U         UCG          u 


Annotation confidence Not enough data
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Genome context
Ultra445: 3003013-3003138 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oan-mir-302-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-302-3p

Accession MIMAT0007195
Description Ornithorhynchus anatinus oan-miR-302-3p mature miRNA
Sequence 78 - UAAGUGCUUCCAUGUUUUAGU - 98
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004