miRBase entry: oan-mir-1390

Stem-loop oan-mir-1390


Accession
MI0006893
Description
Ornithorhynchus anatinus oan-mir-1390 precursor miRNA


Sequence

80 reads, 3 reads per million, 4 experiments
aauaaaucagugcaucugaauauaaagggaUAUACAGAUUCGAGUAUGCAUauguaauauacucuaugUGCACACUCAUAUCUGUAUAACccuauauauucauauauauuguauauauu
.......(((((.((.((((((((.((((.(((((((((..((((.((((((((..........)))))))).))))..))))))))).)))).)))))))).)).)))))........

Structure
-aauaaau     c  c        a    a         UC    A        uaau 
        cagug au ugaauaua aggg UAUACAGAU  GAGU UGCAUaug    a
        ||||| || |||||||| |||| |||||||||  |||| ||||||||     
        guuau ua acuuauau uccC AUAUGUCUA  CUCA ACGUguau    u
uuauauau     a  u        a    A         UA    C        cuca 


Annotation confidence Not enough data
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Genome context
Ultra395: 434476-434594 [-]

Database links

Mature oan-miR-1390-5p

Accession MIMAT0007176
Description Ornithorhynchus anatinus oan-miR-1390-5p mature miRNA
Sequence 31 - UAUACAGAUUCGAGUAUGCAU - 51
Evidence experimental
Illumina [1]

Mature oan-miR-1390-3p

Accession MIMAT0007177
Description Ornithorhynchus anatinus oan-miR-1390-3p mature miRNA
Sequence 69 - UGCACACUCAUAUCUGUAUAAC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004