miRBase entry: oan-mir-191

Stem-loop oan-mir-191


Accession
MI0006879
Description
Ornithorhynchus anatinus oan-mir-191 precursor miRNA
Gene family
MIPF0000194; mir-191


Sequence

13679 reads, 295 reads per million, 5 experiments
uggagcauccuugacagcuugacagcaggCAACGGAAUCCCAAAAGCAGCUguugucuccagagcauuccaGCUGCAGUUGGAUUUCGUUcccugcuauccugcaagagcacca
(((.((...((((.(((...((.((((((.((((((((((.((..(((((((.(((.......)))...)))))))..)))))))))))).)))))).))))))))).)).)))

Structure
   a  auc    a   cuu  c      C          C  AA       --u   cu 
ugg gc   cuug cag   ga agcagg AACGGAAUCC AA  GCAGCUg   ugu  c
||| ||   |||| |||   || |||||| |||||||||| ||  |||||||   |||  c
acc cg   gaac guc   cu ucgucc UUGCUUUAGG UU  CGUCGac   acg  a
   a  --a    -   ---  a      c          -  GA       cuu   ag 


Annotation confidence High
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Genome context
Ultra32: 73507-73620 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oan-mir-191
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oan-miR-191-5p

Accession MIMAT0007152
Description Ornithorhynchus anatinus oan-miR-191-5p mature miRNA
Sequence 30 - CAACGGAAUCCCAAAAGCAGCU - 51
Evidence experimental
Illumina [1]
Database links

Mature oan-miR-191-3p

Accession MIMAT0007153
Description Ornithorhynchus anatinus oan-miR-191-3p mature miRNA
Sequence 72 - GCUGCAGUUGGAUUUCGUU - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004