Stem-loop oan-mir-148

Accession

MI0006868

Description

Ornithorhynchus anatinus oan-mir-148 precursor miRNA

Gene family

MIPF0000056; mir-148

Sequence

486922 reads, 11922 reads per million, 5 experiments

agucuuuugaggcAAAGUUCUGUGACACUCAGACUcugauuaugauagaagUCAGUGCACUACAGAACUUUGUcuccagaggcu
(((((((.((((((((((((((((.((((..(((((((.......))).))))))))...)))))))))))))))).)))))))

Structure

       u                --A    CA    -   au 
agucuuu gaggcAAAGUUCUGUG   CACU  GACU cug  u
||||||| ||||||||||||||||   ||||  |||| |||  a
ucggaga cucUGUUUCAAGACAU   GUGA  CUga gau  u
       c                CAC    --    a   ag 

Annotation confidence High

Genome context

Ultra231: 1160625-1160708 [-]

Mature oan-miR-148-5p

• Accession: MIMAT0007137
• Description: Ornithorhynchus anatinus oan-miR-148-5p mature miRNA
• Sequence: 14 - AAAGUUCUGUGACACUCAGACU - 35
• Evidence: experimental ; Illumina [1]

Mature oan-miR-148-3p

• Accession: MIMAT0007138
• Description: Ornithorhynchus anatinus oan-miR-148-3p mature miRNA
• Sequence: 52 - UCAGUGCACUACAGAACUUUGU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004