Stem-loop oan-mir-1381

Accession

MI0006858

Description

Ornithorhynchus anatinus oan-mir-1381 precursor miRNA

Sequence

12 reads, 0 reads per million, 2 experiments

uuuccaguggguugccUCCCUCGCCCCCUCUCCGGAGCCGuccccucugacucaccgGUACGGGAGGUUGCGAGGUUCgcagcucgggcuggaaua
.((((((((((((((...((((((..((((.(((..((((...............)))).)))))))..))))))...)))))))..)))))))..

Structure

-u       --       cUC      CC    U   GA    uccccu 
  uuccagu  ggguugc   CCUCGC  CCUC CCG  GCCG      c
  |||||||  |||||||   ||||||  |||| |||  ||||      u
  aaggucg  cucgacg   GGAGCG  GGAG GGC  UGgc      g
au       gg       CUU      UU    -   -A    cacuca 

Annotation confidence Not enough data

Genome context

Ultra124: 3177240-3177335 [+]

Mature oan-miR-1381-5p

• Accession: MIMAT0007120
• Description: Ornithorhynchus anatinus oan-miR-1381-5p mature miRNA
• Sequence: 17 - UCCCUCGCCCCCUCUCCGGAGCCG - 40
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1381-3p

• Accession: MIMAT0007121
• Description: Ornithorhynchus anatinus oan-miR-1381-3p mature miRNA
• Sequence: 58 - GUACGGGAGGUUGCGAGGUUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004