miRBase entry: oan-mir-1377

Stem-loop oan-mir-1377


Accession
MI0006849
Description
Ornithorhynchus anatinus oan-mir-1377 precursor miRNA


Sequence

44 reads, 2 reads per million, 4 experiments
ucccggcguugaguacggugcucugcccaCAGUAAGUGCUUAAUAAGGAAUaaugacuacucuuguuauguucuuuauuaaacgcuuacuaugugccgggcgccauuugaagcacuggga
((((((.(((......(((((((.((.((.((((((((.(((((((((((((.((((.......))))))))))))))))).)))))))).)).)).)))))))......))).))))))

Structure
      c   gaguac       u  c  C        C             a    ua 
ucccgg guu      ggugcuc gc ca AGUAAGUG UUAAUAAGGAAUa ugac  c
|||||| |||      ||||||| || || |||||||| ||||||||||||| ||||  u
aggguc cga      ccgcggg cg gu ucauucgc aauuauuucuugu auug  c
      a   aguuua       c  u  a        a             -    uu 


Annotation confidence Not enough data
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Genome context
Contig8551: 8746-8865 [-]

Database links

Mature oan-miR-1377

Accession MIMAT0007107
Description Ornithorhynchus anatinus oan-miR-1377 mature miRNA
Sequence 30 - CAGUAAGUGCUUAAUAAGGAAU - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004