Stem-loop oan-mir-184

Accession

MI0006814

Description

Ornithorhynchus anatinus oan-mir-184 precursor miRNA

Gene family

MIPF0000059; mir-184

Sequence

19421 reads, 324 reads per million, 5 experiments

ucccagaaggcagacgacguccagggcccaucacgucucuuuaucacuuuuccagcccagcuuucugguucuagccguUGGACGGAGAAUUGAUAAGGGUacggggucggcaggagcauccuccggga
((((.((.((..(.(..(..((..(((((....(((.(((((((((.((((((.(.(((((.....(((....)))))))).))))))).))))))))).))))))))))..)..))..)))).))))

Structure

    a  a  ca a ga gu  ag     auca   c         c      a c     uuucu   u 
uccc ga gg  g c  c  cc  ggccc    cgu ucuuuauca uuuucc g ccagc     ggu c
|||| || ||  | |  |  ||  |||||    ||| ||||||||| |||||| | |||||     |||  
aggg cu cc  c g  g  gg  cuggg    gca GGGAAUAGU AAGAGG C GGUug     ccg u
    c  -  ua - ag ac  --     ----   U         U      - A     -----   a 

Annotation confidence Not enough data

Genome context

Contig51342: 2473-2600 [-]

Mature oan-miR-184

• Accession: MIMAT0007045
• Description: Ornithorhynchus anatinus oan-miR-184 mature miRNA
• Sequence: 79 - UGGACGGAGAAUUGAUAAGGGU - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004