miRBase entry: oan-let-7g

Stem-loop oan-let-7g


Accession
MI0006809
Description
Ornithorhynchus anatinus oan-let-7g precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

145509 reads, 2850 reads per million, 5 experiments
uccaggcUGAGGUAGUAGUUUGUACAGUUucagggucuacaauaccacccgguauaggagauaaCUGUACAGGCCACUGCCUUGccaggga
(((.(((.((((((((.((((((((((((.....((((.(.(((((....))))).).)))))))))))))))).))))))))))).))).

Structure
-   a   U        A            ucagg    a a     a 
 ucc ggc GAGGUAGU GUUUGUACAGUU     gucu c auacc c
 ||| ||| |||||||| ||||||||||||     |||| | |||||  
 ggg ccG UUCCGUCA CGGACAUGUCaa     uaga g uaugg c
a   a   -        C            -----    g a     c 


Annotation confidence High
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Genome context
Contig4951: 13333-13423 [+]

Database links

Mature oan-let-7g-5p

Accession MIMAT0007038
Description Ornithorhynchus anatinus oan-let-7g-5p mature miRNA
Sequence 8 - UGAGGUAGUAGUUUGUACAGUU - 29
Evidence experimental
Illumina [1]
Database links

Mature oan-let-7g-3p

Accession MIMAT0007039
Description Ornithorhynchus anatinus oan-let-7g-3p mature miRNA
Sequence 65 - CUGUACAGGCCACUGCCUUG - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004