miRBase entry: oan-mir-30f

Stem-loop oan-mir-30f


Accession
MI0006808
Description
Ornithorhynchus anatinus oan-mir-30f precursor miRNA


Sequence

gacuaagcguaaagaccucuugaacugacUGUAAACAUCCUCCCCUCCGCUgaaguucagagagggaucaaagcgggaaauguuguaguugaguauaguguuuuuauagguuucaguu
((((((((((((((((..((...((((((((..((((((((.(((((..((((...)))).)))))........))))..)))).))))).)))..)).))))))))..)))).))))

Structure
    -    --        cu  uga   -     UA    --    -------C     CG    a 
gacu aagc  guaaagac  cu   acu gacUG  AACA  UCCU        CCCUC  CUga  
|||| ||||  ||||||||  ||   ||| |||||  ||||  ||||        |||||  |||| g
uuga uuug  uauuuuug  ga   uga uugau  uugu  aggg        gggag  gacu  
    c    ga        -u  -ua   g     -g    aa    cgaaacua     -a    u 


Annotation confidence Not enough data
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Genome context
Contig4944: 15292-15409 [+]

Database links

Mature oan-miR-30f

Accession MIMAT0007037
Description Ornithorhynchus anatinus oan-miR-30f mature miRNA
Sequence 30 - UGUAAACAUCCUCCCCUCCGCU - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004