miRBase entry: oan-mir-1369

Stem-loop oan-mir-1369


Accession
MI0006805
Description
Ornithorhynchus anatinus oan-mir-1369 precursor miRNA


Sequence

ccaggauccagcugucuccacagcucgccccuccgggacuuauuacgagguggagaaaugcaggucugggccagcggagacguagcaggaugaagaggUGGGUGAGGAGGGAGAGGgugaaugaguggggugaagauggagagagg
((....((((.((..((((((...((((((((((....((((((..............((((.((((..........)))).).))).............))))))...)))).))))))....))))))...)).))))....))

Structure
  agga    g  -gu      -agc      -    ggga      acgagguggagaaa   - g    gggc 
cc    ucca cu   cuccac    ucgccc cucc    cuuauu              ugc a gucu    c
||    |||| ||   ||||||    |||||| ||||    ||||||              ||| | ||||     
gg    aggu ga   ggggug    agugGG GAGG    GAGUGG              acg u caga    a
  agag    a  agu      agua      A    -GAG      -GUggagaaguagg   a g    ggcg 


Annotation confidence Not enough data
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Genome context
Contig4413: 41891-42036 [+]

Database links

Mature oan-miR-1369

Accession MIMAT0007034
Description Ornithorhynchus anatinus oan-miR-1369 mature miRNA
Sequence 99 - UGGGUGAGGAGGGAGAGG - 116
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004