miRBase entry: oan-mir-1366

Stem-loop oan-mir-1366


Accession
MI0006802
Description
Ornithorhynchus anatinus oan-mir-1366 precursor miRNA


Sequence

10 reads, 16 reads per million, 1 experiments
gacccagagaggaguuccaagccacaucccccacagaguugaagccacccccuucucacccucucaucccuggcucacgugaagccacugcUGCUAUAGAGCUCCUCUGCUGGUc
...((((((((((((((..(((..((........((((..((((.......)))).....))))......((((((....).))))).))..)))...)))))))))).))))..

Structure
gac    -          -ca   ca  ----------------ucccccac    ---uu    cc 
   ccag agaggaguuc   agc  ca                        agag     gaag  a
   |||| ||||||||||   |||  ||                        ||||     ||||  c
   GGUC UCUCCUCGAG   UCG  gu                        ucuc     cuuc  c
-cU    G          AUA   Uc  caccgaagugcacucggucccuac    ccacu    cc 


Annotation confidence Not enough data
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Genome context
Contig4115: 10122-10236 [+]

Database links

Mature oan-miR-1366

Accession MIMAT0007030
Description Ornithorhynchus anatinus oan-miR-1366 mature miRNA
Sequence 92 - UGCUAUAGAGCUCCUCUGCUGGU - 114
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004