miRBase entry: oan-mir-1364

Stem-loop oan-mir-1364


Accession
MI0006800
Description
Ornithorhynchus anatinus oan-mir-1364 precursor miRNA


Sequence

150 reads, 4 reads per million, 4 experiments
agcagcccggcggcagagagggggccggaacccggcucuccugacucccggUUCCACCCUUCCCUCUUUGAAGCggguuugcu
(((((((((.(..(((((((((((..((((((.((.((....))..)).))))))..))..)))))))))..))))).)))))

Structure
     -    g gg         --  cc      c  -c  u 
agcag cccg c  cagagaggg  gg  ggaacc gg  uc c
||||| |||| |  |||||||||  ||  |||||| ||  ||  
ucguu gggC G  GUUUCUCCC  CC  CCUUgg cc  ag c
     u    - AA         UU  CA      c  uc  u 


Annotation confidence Not enough data
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Genome context
Contig37846: 1214-1296 [-]

Database links

Mature oan-miR-1364

Accession MIMAT0007027
Description Ornithorhynchus anatinus oan-miR-1364 mature miRNA
Sequence 52 - UUCCACCCUUCCCUCUUUGAAGC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004