miRBase entry: oan-mir-1360

Stem-loop oan-mir-1360


Accession
MI0006784
Description
Ornithorhynchus anatinus oan-mir-1360 precursor miRNA


Sequence

12 reads, 1 reads per million, 4 experiments
gggacggggcaagAAGGCAGUGGCACAGACAGGGAgcugaagguggcugauuccccugccugccacugccaccuugcccugggccc
(((.(((((((((..((((((((((..(.(((((((((......)))).....)))))).))))))))))..)))))))))..)))

Structure
   -a         AA          CA A     -----    ga 
ggg  cggggcaag  GGCAGUGGCA  G CAGGG     Agcu  a
|||  |||||||||  ||||||||||  | |||||     ||||   
ccc  gucccguuc  ccgucaccgu  c guccc     ucgg  g
   gg         ca          -c -     cuuag    ug 


Annotation confidence Not enough data
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Genome context
Contig2718: 62003-62088 [-]

Database links

Mature oan-miR-1360

Accession MIMAT0007002
Description Ornithorhynchus anatinus oan-miR-1360 mature miRNA
Sequence 14 - AAGGCAGUGGCACAGACAGGGA - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004