miRBase entry: oan-mir-1358

Stem-loop oan-mir-1358


Accession
MI0006776
Description
Ornithorhynchus anatinus oan-mir-1358 precursor miRNA


Sequence

900 reads, 21 reads per million, 5 experiments
ggcugcuggugauuccugaagcgagugaaauguguguauagAACUGAUUUUGUUUGGGAauccacagaaagacaggcc
(.((((((..(((((((.(((((((......((.........))....))))))))))))))..))).....))).).

Structure
- g   -----   gu       g       ugaaau  gug 
 g cug     cug  gauuccu aagcgag      gu   u
 | |||     |||  ||||||| |||||||      ||   a
 c gac     gac  cuaAGGG UUUGUUU      CA   u
c g   agaaa   ac       -       --UAGU  Aga 


Annotation confidence Not enough data
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Genome context
Contig252: 751530-751607 [+]

Database links

Mature oan-miR-1358

Accession MIMAT0006990
Description Ornithorhynchus anatinus oan-miR-1358 mature miRNA
Sequence 42 - AACUGAUUUUGUUUGGGA - 59
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004