miRBase entry: oan-mir-1356

Stem-loop oan-mir-1356


Accession
MI0006756
Description
Ornithorhynchus anatinus oan-mir-1356 precursor miRNA


Sequence

37 reads, 6 reads per million, 5 experiments
uuccuucugaggacgcugugcccccuggaacuuugacaCCCAGGGAGUCUGAGGGGGucccagaagacucugggaa
...((((((.((((.((.(((.((((((...........)))))).))...).)).))))))))))..........

Structure
-------uuc      a    g  g ---  c      aacu 
          cuucug ggac cu u   gc cccugg    u
          |||||| |||| || |   || ||||||    u
          gaagac ccuG GG A   UG GGGACC    g
aagggucuca      -    G  G GUC  A      Caca 


Annotation confidence Not enough data
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Genome context
Contig219929: 524-599 [-]

Database links

Mature oan-miR-1356

Accession MIMAT0006953
Description Ornithorhynchus anatinus oan-miR-1356 mature miRNA
Sequence 39 - CCCAGGGAGUCUGAGGGGG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004