miRBase entry: oan-let-7b

Stem-loop oan-let-7b


Accession
MI0006720
Description
Ornithorhynchus anatinus oan-let-7b precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

813168 reads, 12336 reads per million, 5 experiments
gggaUGAGGUAGUAGGUUGUGUGGUUucaggggagugauuuugccccaaucagaagauaaCUAUACAGCCUACUGCCUUCcc
((((..((((((((((((((((((((...((((..........)))).(((....)))))))))))))))))))))))))))

Structure
    UG                    --------uca    agug 
ggga  AGGUAGUAGGUUGUGUGGUU           gggg    a
||||  ||||||||||||||||||||           ||||     
ccCU  UCCGUCAUCCGACAUAUCaa           cccc    u
    --                    uagaagacuaa    guuu 


Annotation confidence High
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Genome context
Contig12225: 14105-14186 [-]

Database links

Mature oan-let-7b-5p

Accession MIMAT0006897
Description Ornithorhynchus anatinus oan-let-7b-5p mature miRNA
Sequence 5 - UGAGGUAGUAGGUUGUGUGGUU - 26
Evidence experimental
Illumina [1]
Database links

Mature oan-let-7b-3p

Accession MIMAT0006898
Description Ornithorhynchus anatinus oan-let-7b-3p mature miRNA
Sequence 61 - CUAUACAGCCUACUGCCUUC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004