Accession
MI0006719
Description
Ornithorhynchus anatinus
oan-mir-1422k precursor miRNA
Gene family
MIPF0000565;
mir-1422
Sequence
4400
reads,
2780
reads per million, 4 experiments
gugaucauugugaugcugguuuAAGUCCAGACAAGUGUUUUCUguauauuuagauaauguAGAAAACCUUAUCUGGAUUUGUaccagcaucagauuau
((((((....((((((((((.((((((((((.(((.(((((((((((.........)))))))))))))).)))))))))).))))))))))))))))
((((((....((((((((((.((((((((((.(((.(((((((((((.........)))))))))))))).)))))))))).))))))))))))))))
Structure
auug u C U auu
gugauc ugaugcuggu uAAGUCCAGA AAG GUUUUCUguau u
|||||| |||||||||| |||||||||| ||| ||||||||||| a
uauuag acuacgacca GUUUAGGUCU UUC CAAAAGAugua g
---- U A - aua
Annotation confidence
High
Do you think this miRNA is real?
Comments
The 5' mature product seems to be predominantly expressed in platypus, with the 3' product more prevalent in echidna [1].
Genome context
Contig11344: 14337-14434 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from oan-mir-1422k
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature oan-miR-1422k-5p
| Accession | MIMAT0006895 |
| Description | Ornithorhynchus anatinus oan-miR-1422k-5p mature miRNA |
| Sequence | 23 - AAGUCCAGACAAGUGUUUUCU - 43 |
| Evidence |
experimental
Illumina [1] |
Mature oan-miR-1422k-3p
| Accession | MIMAT0006896 |
| Description | Ornithorhynchus anatinus oan-miR-1422k-3p mature miRNA |
| Sequence | 61 - AGAAAACCUUAUCUGGAUUUGU - 82 |
| Evidence |
experimental
Illumina [1] |
References
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