Stem-loop oan-mir-1422i

Accession

MI0006718

Description

Ornithorhynchus anatinus oan-mir-1422i precursor miRNA

Gene family

MIPF0000565; mir-1422

Sequence

1483 reads, 1185 reads per million, 3 experiments

gugaccaucaugauucugguuUCAAUCCAGAGCAGUGUUUUCUuuacauacagauaaucuagAAAACUGCAUCUGGAUUGAUCccagggucauuuuauacac
(((......((((((((((..(((((((((((((((..(((((.................)))))))))).))))))))))..))))))))))......)))

Structure

   accauc          uu          -     GU     uuacaua 
gug      augauucugg  UCAAUCCAGA GCAGU  UUUCU       c
|||      ||||||||||  |||||||||| |||||  |||||       a
cac      uacugggacc  AGUUAGGUCU CGUCA  AAAga       g
   auauuu          CU          A     --     ucuaaua 

Annotation confidence High

Genome context

Contig11344: 13572-13673 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from oan-mir-1422i

Mature oan-miR-1422i-5p

• Accession: MIMAT0006893
• Description: Ornithorhynchus anatinus oan-miR-1422i-5p mature miRNA
• Sequence: 22 - UCAAUCCAGAGCAGUGUUUUCU - 43
• Evidence: experimental ; Illumina [1]

Mature oan-miR-1422i-3p

• Accession: MIMAT0006894
• Description: Ornithorhynchus anatinus oan-miR-1422i-3p mature miRNA
• Sequence: 63 - AAAACUGCAUCUGGAUUGAUC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004