miRBase entry: oan-mir-1331

Stem-loop oan-mir-1331


Accession
MI0006672
Description
Ornithorhynchus anatinus oan-mir-1331 precursor miRNA


Sequence

ugaUGGGGUGGGAGGUUGGUGUGUGugcagucggcuacaggaugaccggacaagggaacggaaacaguuuaugcugcuaacgcggggccgcucgcagacagaaauccugaccauuccacg
...((((((((.(((((..(((.((((.((.(((((.........((......))((((.......))))...((((....))))))))))))))).)))..)).)))..))))))))..

Structure
uga        -G   -  GG   G    c  u     acaggaugaccggacaagg    gg 
   UGGGGUGG  AGG UU  UGU UGug ag cggcu                   gaac  a
   ||||||||  ||| ||  ||| |||| || |||||                   ||||  a
   accuuacc  ucc aa  aca acgc uc gccgg                   uuug  a
-gc        ag   u  ag   g    -  -     ----ggcgcaaucgucgua    ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
17: 1103073-1103192 [-]

Database links

Mature oan-miR-1331

Accession MIMAT0006814
Description Ornithorhynchus anatinus oan-miR-1331 mature miRNA
Sequence 4 - UGGGGUGGGAGGUUGGUGUGUG - 25
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004