miRBase entry: oan-mir-1328

Stem-loop oan-mir-1328


Accession
MI0006662
Description
Ornithorhynchus anatinus oan-mir-1328 precursor miRNA


Sequence

2 reads, 0 reads per million, 2 experiments
gugucuuuagaaaaaaugugagauuguaGAGAGAGAAAUGAGAACUaggccaaaggguucaaaauagaucaggcaaagaaaucacugaaaguacuaguuagguguaucuagaugaauuagcucucuuauaagaacaucuaugcuu
...............((((....((((.(((((((.........(((((((....)))..........((((............))))..((((.........)))))))).........)))))))))))..))))........

Structure
gugucuuuagaaaaa    gaga    a       AAAUGAGAA    gccaaaggguucaaaauaga    gcaaa 
               augu    uugu GAGAGAG         CUag                    ucag     g
               ||||    |||| |||||||         ||||                    ||||      
               uaca    aaua uucucuc         gauc                    aguc     a
-------uucguauc    --ag    -       gauuaagua    -uauguggauugaucaugaa    acuaa 


Annotation confidence Not enough data
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Genome context
1: 21080348-21080492 [+]

Database links

Mature oan-miR-1328

Accession MIMAT0006797
Description Ornithorhynchus anatinus oan-miR-1328 mature miRNA
Sequence 29 - GAGAGAGAAAUGAGAACU - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004