Stem-loop oan-mir-1327

Accession

MI0006661

Description

Ornithorhynchus anatinus oan-mir-1327 precursor miRNA

Sequence

1821 reads, 30 reads per million, 5 experiments

uuaacaaggacuguacuggggacuguucuuUAAAAGGCUGUUAAAUGAUGAUccuauauuuuuuaacgucaaCAUCAUUUAGAAACCUUUUAGAgaacggucuuccucacccacuaccaccggcaaaaa
.......((...(((.(((((((((((((((((((((...((((((((((......................))))))))))...))))))))))))))))).......)))).)))..))........

Structure

-uuaacaa  acu   c    -------                 CUG          AUccuauauu 
        gg   gua uggg       gacuguucuuUAAAAGG   UUAAAUGAUG          u
        ||   ||| ||||       |||||||||||||||||   ||||||||||           
        cc   cau accc       cuggcaagAGAUUUUCC   GAUUUACUAC          u
aaaaacgg  -ac   c    acuccuu                 AAA          aacugcaauu 

Annotation confidence Not enough data

Genome context

1: 16822264-16822392 [-]

Mature oan-miR-1327-5p

• Accession: MIMAT0006796
• Description: Ornithorhynchus anatinus oan-miR-1327-5p mature miRNA
• Sequence: 31 - UAAAAGGCUGUUAAAUGAUGAU - 52
• Evidence: experimental ; Illumina [1-2]

Mature oan-miR-1327-3p

• Accession: MIMAT0026750
• Description: Ornithorhynchus anatinus oan-miR-1327-3p mature miRNA
• Sequence: 73 - CAUCAUUUAGAAACCUUUUAGA - 94
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45