miRBase entry: oan-mir-1325

Stem-loop oan-mir-1325


Accession
MI0006659
Description
Ornithorhynchus anatinus oan-mir-1325 precursor miRNA


Sequence

46 reads, 3 reads per million, 4 experiments
gcagccuccuccuUGGAGGUUUCUGGCCCGGCUGGaauuacguucaagcagccgggcccaaaauguccagguaggaaucugggaagc
.(((..((((.((((((.((((..((((((((((((((...))))...))))))))))..)))).)))))).))))..)))......

Structure
-----g   cc    c      G    CU          ---    u 
      cag  uccu cuUGGA GUUU  GGCCCGGCUG   Gaau  
      |||  |||| |||||| ||||  ||||||||||   |||| a
      guc  agga ggaccu uaaa  ccgggccgac   cuug  
cgaagg   ua    u      g    ac          gaa    c 


Annotation confidence Not enough data
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Genome context
1: 7455189-7455275 [-]

Database links

Mature oan-miR-1325

Accession MIMAT0006794
Description Ornithorhynchus anatinus oan-miR-1325 mature miRNA
Sequence 14 - UGGAGGUUUCUGGCCCGGCUGG - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18463306
    Conservation of small RNA pathways in platypus
    "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
    "Genome Res (2008) 18:995-1004