Stem-loop sequence vvi-MIR169g

AccessionMI0006527 (change log)
DescriptionVitis vinifera miR169g stem-loop
Gene family MIPF0000037; MIR169_2
Literature search

8 open access papers mention vvi-MIR169g
(15 sentences)

Stem-loop 
   --     uaug   c         ug        a  c  uac    ccau    cuu    c 
5'   gaaag    gug agccaagga  acuugccg cu uc   uuag    cugc   ucuc a
     |||||    ||| |||||||||  |||||||| || ||   ||||    ||||   ||||  
3'   cuuuc    uac ucgguuucu  ugaacggc ga ag   aguc    gacg   ggag a
   gu     uucg   a         gu        c  -  --u    --au    uuc    g
Get sequence
Deep sequencing
5873 reads, 350 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (12X; GCA_000003745.2) Overlapping transcripts
chr8: 21104451-21104571 [+]
intergenic
Database links

Mature sequence vvi-miR169g

Accession MIMAT0005682
Sequence

13 -  

cagccaaggaugacuugccga

 - 33

Get sequence
Deep sequencing5492 reads, 2 experiments
Evidence experimental; Array [2]

References

1
PMID:17721507 "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla" Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyere C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro Nature. 449:463-467(2007).
2
PMID:19939267 "High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera" Mica E, Piccolo V, Delledonne M, Ferrarini A, Pezzotti M, Casati C, Del Fabbro C, Valle G, Policriti A, Morgante M, Pesole G, Pe ME, Horner DS BMC Genomics. 10:558(2009).