Stem-loop sequence vvi-MIR166g

AccessionMI0006513 (change log)
DescriptionVitis vinifera miR166g stem-loop
Gene family MIPF0000004; MIR166
Literature search

8 open access papers mention vvi-MIR166g
(15 sentences)

Stem-loop 
   --aaca             uu               c    u   aa  u 
5'       guugaggggaaug  gucugguucgagauc uucg aug  gc c
         |||||||||||||  ||||||||||||||| |||| |||  ||  
3'       caacuccccuuac  cggaccaggcuuuag aagu ugc  cg a
   aaaacc             uu               u    u   ga  a
Get sequence
Deep sequencing
2424959 reads, 1.62e+05 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (12X; GCA_000003745.2) Overlapping transcripts
chr7: 453858-453957 [-]
intergenic
Database links

Mature sequence vvi-miR166g

Accession MIMAT0005668
Sequence

69 -  

ucggaccaggcuucauucccc

 - 89

Get sequence
Deep sequencing2421448 reads, 2 experiments
Evidence experimental; Array [2], Illumina [2]

References

1
PMID:17721507 "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla" Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyere C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro Nature. 449:463-467(2007).
2
PMID:19939267 "High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera" Mica E, Piccolo V, Delledonne M, Ferrarini A, Pezzotti M, Casati C, Del Fabbro C, Valle G, Policriti A, Morgante M, Pesole G, Pe ME, Horner DS BMC Genomics. 10:558(2009).