Stem-loop sequence vvi-MIR156g

AccessionMI0006491 (change log)
DescriptionVitis vinifera miR156g stem-loop
Gene family MIPF0000008; MIR156
Literature search

11 open access papers mention vvi-MIR156g
(92 sentences)

Stem-loop 
   --------     uguugu         -a             u  -   u     ug 
5'         gguga      ugacagaag  uagagagcacaga ga uga gugca  g
           |||||      |||||||||  ||||||||||||| || ||| |||||  a
3'         ccacu      acugucuuc  aucucucguguuu cu acu uacgu  g
   ccccgacu     ------         ag             c  c   c     uu
Get sequence
Deep sequencing
6910135 reads, 4.62e+05 reads per million, 2 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (12X; GCA_000003745.2) Overlapping transcripts
chr17: 3046324-3046426 [-]
intergenic
Database links

Mature sequence vvi-miR156g

Accession MIMAT0005646
Sequence

11 -  

uugacagaagauagagagcac

 - 31

Get sequence
Deep sequencing6910083 reads, 2 experiments
Evidence experimental; Array [2], Illumina [2]

References

1
PMID:17721507 "The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla" Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, Vezzi A, Legeai F, Hugueney P, Dasilva C, Horner D, Mica E, Jublot D, Poulain J, Bruyere C, Billault A, Segurens B, Gouyvenoux M, Ugarte E, Cattonaro Nature. 449:463-467(2007).
2
PMID:19939267 "High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera" Mica E, Piccolo V, Delledonne M, Ferrarini A, Pezzotti M, Casati C, Del Fabbro C, Valle G, Policriti A, Morgante M, Pesole G, Pe ME, Horner DS BMC Genomics. 10:558(2009).