Stem-loop bna-MIR156c

Accession

MI0006484

Description

Brassica napus bna-MIR156c precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

13 open access papers mention bna-MIR156c
(209 sentences)

Sequence

gggagugaugcagguugUUGACAGAAGAUAGAGAGCACuaaggaugacaugcaaguacaaggauauaaggaaauucaagaaagagaggaaaaaagagccugcaucuuuacucuuuugugcucucuauacuucugucaauaccauuauuuauuccu
((((((((....(((.((((((((((((((((((((((.((((((((.(((((.......((...........(((........)))..........)))))))..))).))))).))))))))))).)))))))))))))).....))))))))

Structure

        -ugca   u           -           u     -   -c     aguacaa  auauaaggaaa   aag 
gggaguga     ggu gUUGACAGAAG AUAGAGAGCAC aagga uga  augca       gg           uuc   a
||||||||     ||| ||||||||||| ||||||||||| ||||| |||  |||||       ||           |||    
uccuuauu     cca uaacugucuuc uaucucucgug uuucu auu  uacgu       cc           gag   a
        uauua   -           a           u     c   uc     -------  -gagaaaaaag   aga 

Annotation confidence Not enough data

Genome context

EM:BH950400: 212-366 [-]

Mature bna-miR156c

• Accession: MIMAT0005639
• Description: Brassica napus bna-miR156c mature miRNA
• Sequence: 18 - UUGACAGAAGAUAGAGAGCAC - 38
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856