Stem-loop bna-MIR171c

Accession

MI0006452

Description

Brassica napus bna-MIR171c precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

5 open access papers mention bna-MIR171c
(14 sentences)

Sequence

gcgagauauuagugcgguucaaucaaauagucguacucuuagcuauuagagaucgguuuuguucgaUUGAGCCGUGCCAAUAUCACGc
(((.((((((.(((((((((((((.((((((((..((((........))))..)))..))))).))))))))))))).)))))).)))

Structure

   a      a             a     --   ua    uag 
gcg gauauu gugcgguucaauc aauag  ucg  cucu   c
||| |||||| ||||||||||||| |||||  |||  ||||    
cGC CUAUAA CGUGCCGAGUUag uuguu  ggc  gaga   u
   A      C             c     uu   ua    uua 

Annotation confidence Not enough data

Genome context

EM:DU980843: 159-246 [-]

Mature bna-miR171c

• Accession: MIMAT0005607
• Description: Brassica napus bna-miR171c mature miRNA
• Sequence: 67 - UUGAGCCGUGCCAAUAUCACG - 87
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17659282
   Cloning and characterization of microRNAs from Brassica napus
   "Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL"
   "FEBS Lett (2007) 581:3848-3856