Stem-loop sequence hsa-mir-302e

Accession

MI0006417 (change log)

Symbol

HGNC:MIR302E

Description

Homo sapiens miR-302e stem-loop

Gene family

MIPF0000658; mir-302_2

Literature search

160 open access papers mention hsa-mir-302e
(773 sentences)

Stem-loop

   ----uu     a     ---------     g  --     uu 
5'       gggua gugcu         uccau cu  ucagu  c
         ||||| |||||         ||||| ||  |||||   
3'       uccau cacga         aggua ga  gguca  c
   agauau     c     uaaugaugu     -  au     uu 

Deep sequencing

83 reads, 0 reads per million, 9 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr11: 7234766-7234837 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR302E
• EntrezGene:MIR302E
• HGNC:MIR302E
• miRBase Tracker:MI0006417

Mature sequence hsa-miR-302e

• Accession: MIMAT0005931
• Sequence: 6 - uaagugcuuccaugcuu - 22
• Deep sequencing: 79 reads, 14 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetMiner:hsa-miR-302e
  • TargetScanVert:hsa-miR-302e
  • miRDB:hsa-miR-302e
  • microrna.org:hsa-miR-302e

References

1. PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).