Stem-loop sequence hsa-mir-1246

Accession

MI0006381 (change log)

Symbol

HGNC:MIR1246

Description

Homo sapiens miR-1246 stem-loop

Gene family

MIPF0000627; mir-1246

Literature search

83 open access papers mention hsa-mir-1246
(525 sentences)

Stem-loop

   --   -au   uga       -------     ag    a u 
5'   ugu   ccu   auggauu       uuugg  cagg g g
     |||   |||   |||||||       |||||  |||| |  
3'   acg   gga   uaccuaa       aaacc  gucc c g
   ua   auc   ---       cuaaagg     ca    a a 

Deep sequencing

257698 reads, 7.47e+03 reads per million, 154 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr2: 176600980-176601052 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR1246
• HGNC:MIR1246
• RNAcentral:URS000075AC0B_9606
• miRBase Tracker:MI0006381

Mature sequence hsa-miR-1246

• Accession: MIMAT0005898
• Sequence: 11 - aauggauuuuuggagcagg - 29
• Deep sequencing: 257690 reads, 156 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS000028C188_9606
• Predicted targets:
  • TargetMiner:hsa-miR-1246
  • TargetScanVert:hsa-miR-1246
  • miRDB:hsa-miR-1246
  • microrna.org:hsa-miR-1246

References

1. PMID:18285502 "Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells" Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA Genome Res. 18:610-621(2008).