miRBase entry: hsa-mir-1289-2

Stem-loop hsa-mir-1289-2


Accession
MI0006351
Symbol
HGNC: MIR1289-2
Description
Homo sapiens hsa-mir-1289-2 precursor miRNA
Gene family
MIPF0000626; mir-1289

Literature search
1 open access papers mention hsa-mir-1289-2
(1 sentences)

Sequence

28 reads, 2 reads per million, 18 experiments
ccacgguccuaguuaaaaaggcacauuccuagacccugccucagaacuacugaacagagucacugggugUGGAGUCCAGGAAUCUGCAUUUUuaccccuaucgcccccgcc
....(((..(((.((((((.(((.((((((.(((.(((((((((.(((.((....)))))..))))).)))).))).)))))).))).))))))...)))..)))......

Structure
--ccac   cc   --u      g   c      a   c    -     -a   a  g 
      ggu  uag   uaaaaa gca auuccu gac cugc cucag  acu cu a
      |||  |||   |||||| ||| |||||| ||| |||| |||||  ||| ||  
      ccg  auc   auUUUU CGU UAAGGA CUG GGUg ggguc  uga ga a
ccgccc   cu   ccc      A   C      C   A    u     ac   -  c 


Annotation confidence Not enough data
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Genome context
chr5: 133427596-133427706 [-]

Database links

Mature hsa-miR-1289

Accession MIMAT0005879
Description Homo sapiens hsa-miR-1289 mature miRNA
Sequence 70 - UGGAGUCCAGGAAUCUGCAUUUU - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18285502
    Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    "Morin RD, O'Connor MD, Griffith M, Kuchenbauer F, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Eaves CJ, Marra MA"
    "Genome Res (2008) 18:610-621