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miRBase |
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Stem-loop sequence mmu-mir-1197 |
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Accession | MI0006305 (change log) | |||||||||||||||||||||||||||||||||
Symbol | MGI:Mir1197 | |||||||||||||||||||||||||||||||||
Description | Mus musculus miR-1197 stem-loop | |||||||||||||||||||||||||||||||||
Gene family | MIPF0000126; mir-379 | |||||||||||||||||||||||||||||||||
Stem-loop |
gugagcuggaaucagccagcguuaccucaa -u ugc u gug g - uuu 5' gguauu gaaga ggu gaccaug u uacg c a |||||| ||||| ||| ||||||| | |||| | u 3' cuauaa cuucu uca cugguac g augc g u --------------------ccgcucuaca cu --- u aca g a uau |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mmu-miR-1197-5p |
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Accession | MIMAT0017331 |
Previous IDs | mmu-miR-1197* |
Sequence |
45 - cgguugaccaugguguguacg - 65 |
Deep sequencing | 25 reads, 13 experiments |
Evidence | experimental; Illumina [3] |
Predicted targets |
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Mature sequence mmu-miR-1197-3p |
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Accession | MIMAT0005858 |
Previous IDs | mmu-miR-1197 |
Sequence |
80 - uaggacacauggucuacuucu - 100 |
Deep sequencing | 823 reads, 45 experiments |
Evidence | experimental; 454 [1], Illumina [2-3] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:17989215
"RNA sequence analysis defines Dicer's role in mouse embryonic stem cells"
Proc Natl Acad Sci U S A. 104:18097-18102(2007).
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2 |
PMID:20215419
"MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing"
Mol Hum Reprod. 16:463-471(2010).
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3 |
PMID:20413612
"Mammalian microRNAs: experimental evaluation of novel and previously annotated genes"
Genes Dev. 24:992-1009(2010).
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