Stem-loop sequence mmu-mir-466i

Accession

MI0006282 (change log)

Symbol

MGI:Mir466i

Description

Mus musculus miR-466i stem-loop

Gene family

MIPF0000316; mir-467

Literature search

32 open access papers mention mmu-mir-466i
(77 sentences)

Stem-loop

   agagaucaugucagugaacugccacauuuuuga       ua           -                     u 
5'                                  uauauau  uguauguaugu gugugugugugugugugugua a
                                    |||||||  ||||||||||| |||||||||||||||||||||  
3'                                  auauaua  acguauguaca cacacauacacacacacauau u
   --------------------------------c       ca           u                     a 

Deep sequencing

12927 reads, 4.99e+03 reads per million, 163 experiments

Confidence

Annotation confidence: low

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr13: 17747473-17747593 [+]
• Overlapping transcripts:

  antisense

  ENSMUST00000042365 ; Cdk13-201; intron 7

Database links

• EntrezGene:Mir466i
• MGI:Mir466i
• RNAcentral:URS000075C7C5_10090
• miRBase Tracker:MI0006282

Mature sequence mmu-miR-466i-5p

• Accession: MIMAT0017325
• Sequence: 53 - ugugugugugugugugugug - 72
• Deep sequencing: 2281 reads, 147 experiments
• Evidence: experimental; 454 [2]
• Predicted targets:
  • TargetScanVert:mmu-miR-466i-5p
  • miRDB:mmu-miR-466i-5p

Mature sequence mmu-miR-466i-3p

• Accession: MIMAT0005834
• Previous IDs: mmu-miR-466i
• Sequence: 80 - auacacacacacauacacacua - 101
• Deep sequencing: 10292 reads, 154 experiments
• Evidence: experimental; 454 [1]
• Database links:
  • RNAcentral:URS00005662FF_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-466i-3p
  • miRDB:mmu-miR-466i-3p
  • microrna.org:mmu-miR-466i-3p

References

1. PMID:17989215 "RNA sequence analysis defines Dicer's role in mouse embryonic stem cells" Calabrese JM, Seila AC, Yeo GW, Sharp PA Proc Natl Acad Sci U S A. 104:18097-18102(2007).
2. PMID:20668074 "Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68" Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H J Virol. 84:10266-10275(2010).