miRBase entry: xtr-mir-320

Stem-loop xtr-mir-320


Accession
MI0006266
Description
Xenopus tropicalis xtr-mir-320 precursor miRNA


Sequence

uuccccccugcuaagcaauuaugccaaucaacuuagugcaaucacacgcuacaguugauuguaauaaaggAAAAGCUGGGUUGAGAGGUGAcaugauuugcuggagguauaaaguuacug
......(((.(..((((((((((((..(((((((((((((((((.((......)))))))))............))))))))))..))...))))).)))))).))).............

Structure
-------uucccc   g ua     -     ---  aa          ------------       c  gc 
             ccu c  agcaa uuaug   cc  ucaacuuagu            gcaauca ac  u
             ||| |  ||||| |||||   ||  ||||||||||            ||||||| ||   
             gga g  ucguu aguac   GG  AGUUGGGUCG            uguuagu ug  a
gucauugaaauau   g --     u     AGU  AG          AAAAggaaauaa       -  ac 


Annotation confidence Not enough data
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Genome context
chr7: 80077496-80077615 [+]

Database links

Mature xtr-miR-320

Accession MIMAT0005564
Description Xenopus tropicalis xtr-miR-320 mature miRNA
Sequence 71 - AAAAGCUGGGUUGAGAGGUGA - 91
Evidence not_experimental

References

  1. PubMed ID: 18032731
    Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation
    "Tang GQ, Maxwell ES"
    "Genome Res (2008) 18:104-112