miRBase entry: tae-MIR1131

Stem-loop tae-MIR1131


Accession
MI0006193
Description
Triticum aestivum tae-MIR1131 precursor miRNA

Literature search
3 open access papers mention tae-MIR1131
(3 sentences)

Sequence

5695 reads, 104 reads per million, 116 experiments
cauUAGUACCGGUUCGUGGCUAACCuuuagcaccgguucgugccacgaaccgguacuaaugagggugguggcaggauguugucagucugggcccccucca
.(((((((((((((((((((.((((.........))))...)))))))))))))))))))(((((.(((..((((.((....)).)))).))))))))..

Structure
---------------------------------------c                   --U    uuu 
                                        auUAGUACCGGUUCGUGGC   AACC   a
                                        |||||||||||||||||||   ||||   g
                                        uaaucauggccaagcaccg   uugg   c
accucccccgggucugacuguuguaggacgguggugggag                   ugc    cca 


Annotation confidence Low
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Comments
Yao et al. misname this sequence miR515 in [1]. miR1131 is unrelated to mammalian miR-515;

Genome context
1B: 17546649-17546748 [-]

Database links

Mature tae-miR1131

Accession MIMAT0005366
Description Triticum aestivum tae-miR1131 mature miRNA
Sequence 4 - UAGUACCGGUUCGUGGCUAACC - 25
Evidence experimental
cloned [1], Northern [1]

References

  1. PubMed ID: 17543110
    Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)
    Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q
    Genome Biol (2007) 8:R96