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miRBase |
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Stem-loop sequence rno-mir-425 |
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Accession | MI0006146 (change log) | |||||||
Description | Rattus norvegicus miR-425 stem-loop | |||||||
Gene family | MIPF0000242; mir-425 | |||||||
Literature search |
4 open access papers mention rno-mir-425 | |||||||
Stem-loop |
-- u u aau cac u ----ag g 5' ag gc uugg gacacgau ucccg ug ugg c || || |||| |||||||| ||||| || ||| 3' uc cg gacc cugugcua agggc ac acc a uu u u cgc -ua u cgaaga c |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence rno-miR-425-5p |
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Accession | MIMAT0005314 |
Previous IDs | rno-miR-425 |
Sequence |
11 - aaugacacgaucacucccguuga - 33 |
Deep sequencing | 244997 reads, 497 experiments |
Evidence | experimental; cloned [1], SOLiD [2] |
Predicted targets |
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Mature sequence rno-miR-425-3p |
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Accession | MIMAT0017306 |
Previous IDs | rno-miR-425* |
Sequence |
52 - aucgggaauaucguguccgcc - 72 |
Deep sequencing | 15572 reads, 481 experiments |
Evidence | experimental; SOLiD [2] |
Predicted targets |
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References |
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1 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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2 |
PMID:20403161
"Small RNA expression and strain specificity in the rat"
BMC Genomics. 11:249(2010).
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