miRBase entry: smo-MIR1115

Stem-loop smo-MIR1115


Accession
MI0006102
Description
Selaginella moellendorffii smo-MIR1115 precursor miRNA


Sequence

ccagcaagguUGAGCUCAGGCACUUUGGUGGccuggggggcuaagguuauucaaauaaucuuagccccucaggUCACCAAAGUGCCUGAGCUCAagcuugggcu
....((((.(((((((((((((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))))))))))))).))))....

Structure
ccag    g                                         u 
    caag uUGAGCUCAGGCACUUUGGUGGccuggggggcuaagguuau c
    |||| |||||||||||||||||||||||||||||||||||||||||  
    guuc aACUCGAGUCCGUGAAACCACUggacuccccgauucuaaua a
ucgg    g                                         a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR1115-5p

Accession MIMAT0005273
Description Selaginella moellendorffii smo-miR1115-5p mature miRNA
Sequence 11 - UGAGCUCAGGCACUUUGGUGG - 31
Evidence experimental
454 [1]

Mature smo-miR1115-3p

Accession MIMAT0005274
Description Selaginella moellendorffii smo-miR1115-3p mature miRNA
Sequence 74 - UCACCAAAGUGCCUGAGCUCA - 94
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769