miRBase entry: smo-MIR1092

Stem-loop smo-MIR1092


Accession
MI0006076
Description
Selaginella moellendorffii smo-MIR1092 precursor miRNA


Sequence

guuauguguuuggcgacgagguuUGACAGGAAUGCAUUGGUGUUcuuuucaccaaaaugcgaacgccaugaaaaaaacguucaacaguggaagucaauugauguggggcgcuuuggugaaaauaaugccaaagcauuccugucaagcuucgucacc
...........((.(((((((((((((((((((((.((((((((.(((((((((((..(((..(..(((.((....((.((((....)))).))...)).)))..)..)))))))))))))).)))))))).))))))))))))))))))))).))

Structure
guuauguguuu  c                     A        c           au   aa gc   g  aaaa  g    a 
           gg gacgagguuUGACAGGAAUGC UUGGUGUU uuuucaccaaa  gcg  c  cau aa    ac uuca c
           || ||||||||||||||||||||| |||||||| |||||||||||  |||  |  ||| ||    || ||||  
           cc cugcuucgaacuguccuuacg aaccguaa aaaagugguuu  cgc  g  gua uu    ug aggu a
-----------  a                     a        u           --   gg gu   g  -aac  a    g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR1092

Accession MIMAT0005245
Description Selaginella moellendorffii smo-miR1092 mature miRNA
Sequence 24 - UGACAGGAAUGCAUUGGUGUU - 44
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769