miRBase entry: smo-MIR1091

Stem-loop smo-MIR1091


Accession
MI0006075
Description
Selaginella moellendorffii smo-MIR1091 precursor miRNA


Sequence

ggccucuggcauucgugCGGCAGUGAGGGAGGAUUUGCcaauaauccauagugccauaaaggaagauguugcugugguuccuucacugugucaugaagugccuggagguccuccuugauugcagcacgcauaaccgcaacauucacugcucuagccauggcaaccacauccuccuucaaugcaccauggaucgcuugcaaauccucccucacugcugcacgaauggaucccauuc
((..((...(((((((((((((((((((((((((((((.....((((((.((((....(((((.(((((((((((((((.(((((........)))))....(.((((....)))).).(((.....))).....(((........)))...))))))))))...))))).)))))....)))).)))))).....)))))))))))))))))))))))))))))))..))....

Structure
----  cc  ugg                             caaua      a    caua     a     ---          -----------------------------------------------------c     cug 
    gg  uc   cauucgugCGGCAGUGAGGGAGGAUUUGC     auccau gugc    aagga gaugu   ugcugugguu                                                      cuuca   u
    ||  ||   |||||||||||||||||||||||||||||     |||||| ||||    ||||| |||||   ||||||||||                                                      |||||    
    cc  ag   guaagcacgucgucacucccuccuaaacg     uaggua cacg    uuccu cuaca   acgguaccga                                                      gaagu   g
cuua  cu  ---                             uucgc      c    uaac     c     cca          ucucgucacuuacaacgccaauacgcacgacguuaguuccuccuggagguccgu     acu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR1091

Accession MIMAT0005244
Description Selaginella moellendorffii smo-miR1091 mature miRNA
Sequence 18 - CGGCAGUGAGGGAGGAUUUGC - 38
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769