miRBase entry: smo-MIR1088

Stem-loop smo-MIR1088


Accession
MI0006072
Description
Selaginella moellendorffii smo-MIR1088 precursor miRNA
Gene family
MIPF0000008; MIR156


Sequence

cgagcaggccucuagaCAGAAGAAAGAGAGCACGCAUgaacacugccucugauugcagccucgauGCGUGCUCUUUUUCUUCUGUCgggagucccu
......((.((((.(((((((((((((((((((((((.....((((........)))).....))))))))))))))))))))))).)))).))..

Structure
cgagca  c    a                       gaaca    cuc 
      gg cucu gaCAGAAGAAAGAGAGCACGCAU     cugc   u
      || |||| |||||||||||||||||||||||     ||||    
      cc gagg CUGUCUUCUUUUUCUCGUGCGua     gacg   g
----uc  u    g                       gcucc    uua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR1088-5p

Accession MIMAT0005240
Description Selaginella moellendorffii smo-miR1088-5p mature miRNA
Sequence 17 - CAGAAGAAAGAGAGCACGCAU - 37
Evidence experimental
454 [1]

Mature smo-miR1088-3p

Accession MIMAT0005241
Description Selaginella moellendorffii smo-miR1088-3p mature miRNA
Sequence 66 - GCGUGCUCUUUUUCUUCUGUC - 86
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769