miRBase entry: smo-MIR396

Stem-loop smo-MIR396


Accession
MI0006060
Description
Selaginella moellendorffii smo-MIR396 precursor miRNA
Gene family
MIPF0000047; MIR396


Sequence

ucucaugcuuUUCCACGGCUUUCUUGAACCuggugcucuuccaaggcaggaggaucagaaaacguugugguauuucucaucuccucgucucguccuuggucuccccuugaaagaaacucaccaguaagaguacgaaguucaagaaagcugugggaaacaauggccgga
..((((..(((((((((((((((((((((.(.((((((((((((((((.(((((..(((((((......)).)))))....))))).)...).))))))..........................)))))))).).)))))))))))))))))))))..)))).....

Structure
---uc    gc                     C g        --------------------------      - --- g     --uc     -  gu 
     ucau  uuUUCCACGGCUUUCUUGAAC u gugcucuu                          ccaagg c   a gagga    agaaa ac  u
     ||||  ||||||||||||||||||||| | ||||||||                          |||||| |   | |||||    ||||| ||   
     ggua  aaagggugucgaaagaacuug a caugagaa                          gguucc g   u cuccu    ucuuu ug  g
aggcc    ac                     a g        ugaccacucaaagaaaguuccccucu      u cuc g     cuac     a  gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature smo-miR396

Accession MIMAT0005227
Description Selaginella moellendorffii smo-miR396 mature miRNA
Sequence 11 - UUCCACGGCUUUCUUGAACC - 30
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769