Stem-loop smo-MIR166a

Accession

MI0006053

Description

Selaginella moellendorffii smo-MIR166a precursor miRNA

Gene family

MIPF0000004; MIR166

Sequence

agcaaguccuggauguggggauuguugccuggcucgagggaggcauuccuuugaucuuuucucuccugggaaguacuccagaagaacugugccagaaaugugcgcucUCGGACCAGGCUUCAUUCCCCucaucugagauugcacc
.((((.((.((((((.(((((.((..((((((.(((((((..((((...((((..(..((((...(((((......))))).))))..)...))))...)))).))))))).))))))..)).))))).)))))).))))))...

Structure

--a    g  c      u     u  uu      c       ag    ucc    -au uu    cuc     aa 
   gcaa uc uggaug gggga ug  gccugg ucgaggg  gcau   uuug   c  uucu   cuggg  g
   |||| || |||||| ||||| ||  |||||| |||||||  ||||   ||||   |  ||||   |||||   
   cguu ag gucuac CCCCU AC  CGGACC GGCUcuc  cgug   agac   g  aaga   gaccu  u
cca    -  a      u     U  UU      A       -g    uaa    cgu uc    --a     ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature smo-miR166a

• Accession: MIMAT0005220
• Description: Selaginella moellendorffii smo-miR166a mature miRNA
• Sequence: 108 - UCGGACCAGGCUUCAUUCCCC - 128
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769