miRBase entry: ppt-MIR1061

Stem-loop ppt-MIR1061


Accession
MI0006020
Description
Physcomitrella patens ppt-MIR1061 precursor miRNA


Sequence

gugcugggcacgcaauaagcaugugagcaUUAUUUCAUAGACUACUCAAAccucucaaagguagggauagaccucugagaugcuuUGAGUAGUCAAUGGAAUAAUGaugcuguccauaaacuugaugugugg
........((((((.((((..(((((((((((((((((.((((((((((((.(((((.((((........)))).))))).).))))))))))).)))))...))))))))...))))..)))).)))))).

Structure
gugcuggg      a    ca    ---        ---     A           - c     a    agg 
        cacgca uaag  ugug   agcaUUAU   UUCAU GACUACUCAAA c ucuca aggu   g
        |||||| ||||  ||||   ||||||||   ||||| ||||||||||| | ||||| ||||    
        gugugu guuc  auac   ucguaGUA   AGGUA CUGAUGAGUuu g agagu ucca   a
-------g      a    aa    cug        AUA     A           c u     c    gau 


Annotation confidence Not enough data
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Genome context
Chr05: 5936169-5936300 [+]

Database links

Mature ppt-miR1061-5p

Accession MIMAT0005179
Description Physcomitrella patens ppt-miR1061-5p mature miRNA
Sequence 30 - UUAUUUCAUAGACUACUCAAA - 50
Evidence experimental
454 [1]

Mature ppt-miR1061-3p

Accession MIMAT0005180
Description Physcomitrella patens ppt-miR1061-3p mature miRNA
Sequence 86 - UGAGUAGUCAAUGGAAUAAUG - 106
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769