Stem-loop ppt-MIR1060

Accession

MI0006019

Description

Physcomitrella patens ppt-MIR1060 precursor miRNA

Sequence

aggaagauauucuguaccauuuucgaaccUUUGUCAUAGGAUUACACACGcagaauuuuuucuugauaagaccaaucaccuaacgugaaaucgcugcguguguauuccuagacaaaagguuugaauggaagaugcucacacuauc
.(..((....(((...((((..(((((((((((((.(((((.(((((((((((.......((((...))))....((((.....)))).....))))))))))).)))))))).)))))))))))))).)))..))..)......

Structure

-----a ga  auau   gua    uu          -   A     U           ---------------aauuuuu    g 
      g  ag    ucu   ccau  ucgaaccUUU GUC UAGGA UACACACGcag                      ucuu  
      |  ||    |||   ||||  |||||||||| ||| ||||| |||||||||||                      |||| a
      c  uc    aga   ggua  aguuuggaaa cag auccu augugugcguc                      agaa  
cuauca ac  --gu   --a    --          a   -     u           gcuaaagugcaauccacuaacc    u 

Annotation confidence Not enough data

Genome context

Chr10: 6366213-6366357 [-]

Mature ppt-miR1060

• Accession: MIMAT0005178
• Description: Physcomitrella patens ppt-miR1060 mature miRNA
• Sequence: 30 - UUUGUCAUAGGAUUACACACG - 50
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769