Stem-loop ppt-MIR1058

Accession

MI0006017

Description

Physcomitrella patens ppt-MIR1058 precursor miRNA

Sequence

ugugagcagugucuuaucaugacaguuugcagugcucugugauggaaucucuagcggucuuguauacagcucggccacauacaagaccgcuAGAGAUUCCAUCACGAAGCACugcaaacugccgcgaaguacgcuucaugua
.((((..(((((((..((.((.((((((((((((((.((((((((((((((((((((((((((((...((...))...)))))))))))))))))))))))))))).)))))))))))))).)).)))).)))))))))...

Structure

--u    gc     -  ua  a  a              c                            aca  u 
   guga  agugu cu  uc ug caguuugcagugcu ugugauggaaucucuagcggucuuguau   gc  
   ||||  ||||| ||  || || |||||||||||||| ||||||||||||||||||||||||||||   || c
   uacu  ucgca ga  ag gc gucaaacguCACGA GCACUACCUUAGAGAucgccagaacaua   cg  
aug    --     u  --  c  c              A                            cac  g 

Annotation confidence Not enough data

Genome context

Chr22: 9164397-9164538 [-]

Mature ppt-miR1058

• Accession: MIMAT0005176
• Description: Physcomitrella patens ppt-miR1058 mature miRNA
• Sequence: 92 - AGAGAUUCCAUCACGAAGCAC - 112
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769